This year’s crop of Nikon Small World imaging award winners continues to highlight the amazing progress made in the world of microscopy.
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Nikon’s annual photomicrography competition provides a beautiful showcase for the remarkable progress made every year in imaging methods and technologies.
The post Back to the Microscopic World — Nikon’s 2021 Small World Winners appeared first on The Scholarly Kitchen.
The microscope holds a place on the short list of inventions that have changed the world and revolutionized our understanding of science. Microscopes are crucially important public health tools, allowing workers to identify pathogens and correctly diagnose the cause of illnesses. As educational tools, they can excite and engage students, revealing a world invisible to the naked eye. And, as many people who’d love a microscope but don’t have one can tell you, they are also expensive. Millions of doctors, health workers, and patients worldwide lack the resources to benefit from this vital tool, and millions of students have never seen a microscope before. In a dramatic step to address this problem, researchers from Stanford University have designed ultra-low-cost microscopes built from an inexpensive yet durable material: paper. They recently published their designs and data in PLOS ONE.
Meet the Foldscope. Borrowing from the time-honored tradition of origami, the Foldscope is a multi-functional microscope that can be assembled much like a paper doll. Users cut the pieces from a pattern of cardstock, fold it according to the printed lines, and add the battery, LED, and lens, and?voilà?a microscope. 
Click here to watch a video of how one is assembled. Some of their coolest features are as follows:
What’s the total cost, you ask? According to authors, it’s less than a dollar. At that price, it’s easy to imagine widespread use of Foldscopes by many who previously could not afford traditional microscopes. In this TED Talk, Manu Prakash demonstrates the Foldscopes and explains his hopes for them. The authors envision mass producing them and distributing different designs optimized for detecting the pathogens that cause specific diseases, such as Leishmaniasis and E. coli. They could even include simple instructions for how to treat and prepare slides for specific diagnostic tests or provide pathogen identification guides to help health workers in the field make diagnoses. This is just one way in which the ability to see tiny things could make a huge difference in the world.
Low-Cost Mobile Phone Microscopy with a Reversed Mobile Phone Camera Lens
Community Health Workers and Mobile Technology: A Systematic Review of the Literature
Citation: Cybulski JS, Clements J, Prakash M (2014) Foldscope: Origami-Based Paper Microscope. PLoS ONE 9(6): e98781. doi:10.1371/journal.pone.0098781
Images: Images are from Figures 1 and 2 of the published paper
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Observing the world around us is a natural human instinct, and exploring the realm of the tiny and beautiful is especially captivating for scientists and the public alike. The business of building and testing new microscopes, and developing new methods of microscopy, is rapidly changing and evolving over time. As early as 1914, scientists started documenting the history of the microscope.
Thankfully, rather than drawing out what we see through the lens onto a piece of paper, there are now advanced forms of microscopy, like electron microscopy, that allow scientists to scan a substance—with an electron beam—to sample its topography, or surface shape, and produce wonderfully detailed images that also contain tremendous amounts of data. In a separate form of microscopy called fluorescence microscopy, fluorescent proteins—proteins in the cell engineered to have a fluorescent tag—and intracellular proteins fused to a fluorescent protein can be imaged because they emit light in response to certain wavelengths of light coming from the microscope.
In a continuous effort to “see what’s going on a bit better,” Howard Hughes Medical Institute researchers published an article in PLOS ONE today detailing improvements of their relatively new form of 3D super-resolution microscopy. It combines what they call PhotoActivated Localization Microscopy, or PALM (a type of fluorescence microscopy), with electron microscopy (EM), and lets us have a look at organelles, like mitochondria, and the location of nearby proteins, right in the same cell at roughly the same time.
For instance, if we know a specific protein attaches directly to DNA in a specific organelle, PALM allows us to see precisely the nanometer-scale location of this protein, when it is fused to a fluorescent protein. EM on the other hand, allows us to see the overall structure of the organelle, and so combining these to see both at the same time is extremely useful to cell biologists studying structure and function.
In their study design, PALM needs to be performed before EM (see image of sample preparation and setup below), and then the two images are overlaid by correlating the area of fluorescence, seen during fluorescence microscopy, to the area of the cell structure seen during electron microscopy. The overlaid image is the final result, and the goals of the researchers in this improvement study were to optimize the image resolution and the number of useable fluorescent dyes, speed up the protocol, and simplify the equipment involved by moving it from 3D (very difficult, less accessible) to 2D (easier, common in research institutions), in hopes of making this technique accessible to cell biologists.
In this and the previous work, the researchers describe how they combined the two forms of microscopy to achieve the results they were looking for. All forms of microscopy have limitations, especially when it comes to the limits of the optics and sample preparation, and in this case, scientists overcame a barrier between optimizing the available fluorescence and also optimizing the quality of the EM images that were produced.
As you might imagine, the better the overall image quality is, the better biologists can use the image information to help understand the structure and function of biological components, such as organelles and proteins. Additionally, though the cells used in this study were frozen and prepared, there is a possibility that live cells could be directly imaged using this technique.
Though explaining and understanding the method are a little complicated, the pictures make it all worth it—and the scientists would agree. Below are example image sets. The first set is of an image containing mitochondria, or the powerhouse of the cell, and a protein that localizes in its DNA.
The first image in the set shows the result of PALM, the second contains the EM, and the third is the alignment of the two images (and M is for mitochondria).
And here’s a second set, with imaging of a whole cell by traditional confocal microscopy (A), followed by a similar sequence as above (B-D) for a nucleus and the location of a fluorescent dye that adheres to actin (protein) filaments.
The researchers also managed to perform imaging using two colors (title image), demonstrating the versatility of the technique. Check out the full details and image set here, as well as other recent studies involving new imaging techniques here, here, and here.
Citation: Kopek BG, Shtengel G, Grimm JB, Clayton DA, Hess HF (2013) Correlative Photoactivated Localization and Scanning Electron Microscopy. PLoS ONE 8(10): e77209. doi:10.1371/journal.pone.0077209
Image Credits: All images from the article
