“First pilot project by Knowledge Pixels starts with scholarly publishers Pensoft and IOS Press to publish findings as knowledge graph snippets by means of nanopublications….
Until AI technology “learns” how to interpret complex scientific literature and evaluates the data, methodology and evidence behind it, it is our responsibility to make sure what we know today is optimally available to the computer algorithms. In turn, those algorithms would be extremely helpful in assisting researchers to build on the knowledge of yesterday by delivering the right information at the right time in a ready-to-use format.
This is why the team behind Knowledge Pixels, a recent startup that develops software and services, devised a framework to publish scientific findings in a way that is simultaneously human-readable and machine-actionable. To do this, the duo teamed up with forward-looking scholarly publishers Pensoft and IOS Press to implement its goal.
“The dynamic open-science project collection of BiCIKL, titled “Towards interlinked FAIR biodiversity knowledge: The BiCIKL perspective” (doi: 10.3897/rio.coll.105), continues to grow, as the project progresses into its third year and its results accumulate ever so exponentially.
Following the publication of three important BiCIKL deliverables: the project’s Data Management Plan, its Visual identity package and a report, describing the newly built work?ow and tools for data extraction, conversion and indexing and the user applications from OpenBiodiv, there are currently 30 research outcomes in the BiCIKL collection that have been shared publicly to the world, rather than merely submitted to the European Commission.
Shortly after the BiCIKL project started in 2021, a project-branded collection was launched in the open-science scholarly journal Research Ideas and Outcomes (RIO). There, the partners have been publishing – and thus preserving – conclusive research papers, as well as early and interim scientific outputs….”
“Openly accessible and digital-first since the very start, the ZooKeys journal was born on a sunny morning in California during the Entomological Society of America meeting in 2007, when Prof Lyubomir Penev and his renowned colleague Dr Terry Erwin from the Smithsonian Institution agreed over breakfast that zoologists from around the world could indeed use a new-age taxonomic journal. What the community at the time was missing was a scholarly outlet that would not only present a smooth fast track for their research papers, while abiding by the highest and most novel standards in the field, but do so freely and openly to any reader at any time and in any place. Fast forward to 2021, ZooKeys remains the most prolific open-access journal in zoology….”
“During a breakout room at the recent SORTEE conference, Daniel Mietchen suggested an intriguing idea: what if we were to develop a common (machine-readable) format for the various pledges that researchers take and **publish these pledges in an indexed journal**. This could help to increase visibility of the pledges, provide citeable DOIs, celebrate researchers who commit to positive action, and facilitate searches/meta-research on the pledge space (because everything would now be machine-readable). Daniel also pointed out that Research Ideas and Outcomes (RIO) already publishes a variety of ‘alternative’ research outputs beyond articles and could thus incorporate this new pledge format relatively easily. …”
Abstract: Since Research Ideas and Outcomes was launched in late 2015, it has stimulated experimentation around the publication of and engagement with research processes, especially those with a strong open science component. Here, we zoom in on the first 300 RIO articles that have been published and elucidate how they relate to the different stages and variants of the research cycle, how they help address societal challenges and what forms of engagement have evolved around these resources, most of which have a nature and scope that would prevent them from entering the scholarly record via more traditional journals. Building on these observations, we describe some changes we recently introduced in the policies and peer review process at RIO to further facilitate engagement with the research process, including the establishment of an article collections feature that allows us to bring together research ideas and outcomes from within one research cycle or across multiple ones, irrespective of where they have been published.
“The current dissatisfaction with scientific publishers is an obvious issue, with practices, such as ‘double dipping’ and services, such as the reprint servers, becoming the reason for the community to ask: what exactly is the added value of a traditional publisher? From our point of view, as a fully gold open access publisher and technology provider, there is an urgent need for publishers to demonstrate transparency, when it comes to forming their price policy, alongside a strong will to develop and adapt technologically together with the needs of the community. This is exactly why we have projects such as the Research Ideas and Outcomes (RIO) journal (www.riojournal.com), in our portfolio. RIO demonstrates our will to work towards true open science, where outputs along the full research cycle are published alongside the final peer-reviewed research article. These include research proposals, data, methods, negative results, presentation abstracts, software descriptions in a single research project collection. Opening the research cycle in this way does not only stimulate re-use and help researchers avoid duplication of work, but can also promote collaboration and interdisciplinarity. The real value to publish in RIO also comes from the fact that upon publication all these outputs become citable and discoverable. This functionality is, in fact, enabled on all our journals thanks to our publishing platform ARPHA, which is specifically developed to provide high level of automation and technologically advanced workflows, not only on terms of dissemination of archiving, but also for semantic enhancements of published content and integrations with industry’s leading service providers. …”
“Research Ideas & Outcomes (RIO) is the latest scholarly journal seeking to fix the broken scientific publishing system. It has been created specifically to enable and encourage the entire research cycle to be published, including research proposals and ideas. Founding editor Ross Mounce outlines what the journal seeks to achieve and how it will speed up the publishing process by eliminating the need for an outsourced typesetting process.”