“Why — despite live examples of seeing the impact of open research practices and the indication from researchers and the academic community that they want open research practices to be the norm — is there such a disparity between awareness, behavior, and action? How can we close this gap so that behaviors align with aspirations around open science?
Putting all these studies together, the reasons presented for the gap are mixed but include concerns around data misuse; lack of credit for sharing data; and the need for better support in how to make data and research sustainably open. Mandates, particularly funder mandates for this particular sample group, seem to have a limited role in driving authors to practice open research (although that may well change with new mandates for data sharing coming into effect from very large funding bodies such as federal agencies in the US). Comparatively, institutional encouragement had relatively good success. Where applicable, journal requirements to share materials, code, or data, or journal encouragement to facilitate preprint deposition, drove the same or greater degree of success as institutional encouragement….
One conclusion that becomes apparent is that more can be done by publishers and their partners to directly help and facilitate the adoption of open research practices. Encouraging or mandating sharing of objects as part of the manuscript publication process is an effective and efficient way of ensuring that open science practices are followed. Journals have been successful in the past in enforcing data-sharing mandates around the release of protein and nucleic acid sequences, for example, so we know that the right policies and initiatives can bring positive change….”
“Following a successful trial, Springer Nature is extending its partnership with Code Ocean to better integrate code deposition and peer review with the manuscript submission process. Authors from select Nature portfolio titles will now have the option to share their code and data using the code ocean platform when they submit to one of the participating journals, and receive expert support to do so.
Speaking on the partnership, Erika Pastrana, Editorial Director, Health and Applied Sciences, Springer Nature said: “Code is a key component of research and increasingly computational approaches are utilised or developed as part of a research project. At SN, we want to support authors openly sharing and publishing the key research objects that support the manuscript, such as code, data and protocols. The sharing of code and data improves reproducibility , reduces duplication of effort, supports better transparency and enables faster advancement of research . Moreover, we believe that the code (and other key research objects) should be peer reviewed alongside the manuscript. For this reason, we have looked to deploy suitable technological capabilities to support authors and reviewers to comply with our open science policies. …”
“With the above objectives in mind, EBSCO has now partnered with companies that support open research and enable institutions to gain better stewardship over the totality of their research output: Code Ocean, protocols.io and Arkivum. The first two of these companies provide solutions for the creation, sharing, publication and reuse of computational code, data and research methods. Arkivum, on its part, ensures the long-term data management and preservation of research. Through these partnerships, libraries may support and deliver open platforms to the research community and, at the same time, benefit from improved visibility into and stewardship over the research that is created within the institution….
“Many funders and health organizations are demanding that research approaches and results be made open. Preprints have offered one solution, and their value during this challenging time has been evident in the huge volume of COVID-19 related content appearing online. For example, this collection of COVID-19 SARS-CoV-2 preprints on medRxiv and bioRxiv has more than 1900 manuscripts.
Now, protocols.io and Code Ocean are working to ensure that those research approaches remain open. These open access online tools are ideal repositories for all protocol and methodological approaches as well as computational pipelines and code. Online collaborative research tools are helpful to researchers who are restricted in how they can work and collaborate. For those at the frontline conducting scientific research, these tools serve as an ideal way to share their insights and approaches.
Here’s how protocols.io and Code Ocean are supporting the research community during this unprecedented time:…”